Analyze GeneSets

Your projects are listed below. Select a project to analyze. Click "+" to expand your project and select individual gene sets. Click on one of the tools buttons below to analyze your gene sets. Click Delete to remove individual projects. This will not delete your GeneSets from the ODE database.

Analysis Tools

HiSim Graph
Biclique-based analysis is used to generate hierarchical maps of gene set interactions

GeneSet Graph
Visualize the Gene-GeneSet graph.

Jaccard Overlap
This tool computes the Jaccard Coefficient (a measure of similarity) for multiple genesets.

GeneSet Clustering
Jaccard Distance (a measure of dissimilarity) is used to cluster GeneSets

ABBA Gene-Centered Search
Find Genes most closely associated with your gene(s) of interest

Boolean Algebra
Use advanced set logic to integrate multiple GeneSets

Combine GeneSets
Advanced tool to combine multiple GeneSets into a single association matrix

Project Utilities

You do not have any projects. You can either use your own GeneSets, or search for GeneSets to add to a new project. Once you have a project created, you only need to select it and then click on the button for the analysis you'd like to run.